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Fellowship

Training Program in Pulmonary and Critical Care Medicine
University of California, San Francisco

INTRODUCTION

The goal of our program is to train physicians for academic careers in Pulmonary and Critical Care Medicine. To achieve this goal, we offer 18 months of clinical training in Pulmonary and Critical Care Medicine, followed by 18 or more months of basic or clinical research training. Academic training is accomplished by intensive, personal faculty supervision of trainees in a setting that provides well-equipped clinical and research facilities and an environment that fosters scientific inquiry.

Since the Program began nearly 50 years ago, approximately 80% of our graduates have chosen careers in full-time academic medicine and research. In addition to academic appointments in Pulmonary and Critical Care Medicine, many of our graduates have been Division Chiefs, Department Chairs, and Deans.  Our program prepares trainees intellectually and scientifically to compete successfully for extramural funding, as evidenced by the 18 NIH K-awards received by recent graduates over the last 7 years.

The Clinical Training Program at UCSF has been directed in turn by John F. Murray, Philip Hopewell, H. Benfer Kaltreider, and Stephen C. Lazarus.  Throughout this period, the Research Training Program has been directed by Jay A. Nadel.

The Training Program in Pulmonary and Critical Care Medicine at UCSF is staffed by 49 full-time faculty involved in the program’s day-to-day operation. Our internationally recognized faculty possess a broad array of clinical and research interests covering the major fields of pulmonary medicine, and lead research programs that are among the best funded in the nation. Some of the faculty are engaged exclusively in laboratory-based research, whereas others are committed to clinical activities and investigations. This mix of interests and activities promotes a balanced approach to training.

The Training Program in Pulmonary and Critical Care Medicine is based in three hospitals: Moffitt-Long Hospital (MLH), San Francisco Veterans Affairs Medical Center (SFVAMC) and San Francisco General Hospital (SFGH). Each of these hospitals provides a unique patient population and training environment, and is staffed by full-time UCSF faculty. Residents and Clinical Fellows in internal medicine and its subspecialties rotate among the three hospitals.  Talmadge King is Chairman of the Department of Medicine at UCSF and oversees the program at all 3 sites.

During the first year, fellows rotate among MLH, SFVAMC and SFGH, where they receive clinical training in pulmonary and critical care medicine, including a sleep rotation at the UCSF/Mt. Zion Hospital.

During the second year, fellows undertake 6 months of critical care medicine training at MLH and SFGH. The remainder of the second year and all of the third year are spent in research training.  Although the ACGME requirements for Pulmonary and Critical Care Medicine are met at the end of 3 years, most fellows devote at least 3 years to research training.

CLINICAL TRAINING IN PULMONARY AND CRITICAL CARE MEDICINE
MOFFITT-LONG HOSPITAL (MLH)

MLH is a 560-bed tertiary care referral center that serves Northern California and neighboring states. The hospital offers special services and procedures that attract referrals of patients with a variety of difficult diagnostic and therapeutic problems. In addition, the outpatient clinics in General Internal Medicine provide primary care to many persons in the Bay Area. This combination of referral and primary care patient populations provides a well-balanced mix for the training and clinical research programs of the institution.


Faculty and Attending Staff

Hal Chapman, M.D. is Chief of the Division of Pulmonary and Critical Care Medicine.

Stephen C. Lazarus, M.D. is Director of the Fellowship Program in Pulmonary and Critical Care Medicine

Jay A. Nadel, M.D. directs the NIH Multidisciplinary Research Training Program in Pulmonary Disease.

Members of the Pulmonary & Critical Care Medicine Attending Physician Staff at MLH include:


Pulmonary Consultation Service

The MLH Consultation Service is staffed by one Pulmonary Fellow, a medical resident, medical students, and an attending physician. The Fellows are primarily responsible for performing most of the consultations and for supervising the others. The Attending Physicians make rounds daily and are available at all times. There is no in-house night call for fellows but one fellow is available by telephone or long-range beeper at all times.  Weekend coverage is shared with fellows on the Pulmonary Function Laboratory and Lung Transplant rotations. Fellows may participate in the care of adults with cystic fibrosis and recipients of lung transplants.

While on the Consultation Service, fellows perform bronchoscopy, bronchoalveolar lavage and biopsy procedures under the immediate supervision of an attending physician.  Fellows also receive training in specialized interventional bronchoscopy, including stent and fiducial placement, and needle aspiration/biopsy using endobronchial ultrasound (EBUS).  Approximately 75 bronchoscopic procedures are performed each month. Biopsy specimens are reviewed with staff pathologists in the setting of a weekly teaching conference.

The MLH Department of Radiology has long emphasized chest radiology. Interaction between the Pulmonary Consultation Service and Radiology is a firmly established and valuable part of the training programs in both disciplines. Radiographic studies, including standard films, CT scans, PET scans, and magnetic resonance images are reviewed daily with a chest radiologist. In addition, images of special educational merit are viewed and discussed at the weekly Chest Radiology Conference.

 


Pulmonary Function Laboratory

This is a separate rotation taken by all clinical pulmonary fellows in the first year of training. During this rotation, the fellow performs and interprets tests of pulmonary function. The major emphasis of this rotation is the mastery of advanced pulmonary physiology. In addition, fellows are taught the basic mechanics and logistics of operating a pulmonary function laboratory.

Because of the nature of the patient population at MLH, sophisticated studies of respiratory function are often performed. Thus, in addition to standard screening measurements of lung volumes, flows, diffusion, and arterial blood gases, the laboratory performs inhalation-provocation testing, noninvasive and invasive exercise studies, measurements of lung mechanics, and tests of O2 and CO2 responsiveness. All screening studies are interpreted daily by the fellow and attending physician. Tests other than screening studies are performed by the fellow and supervised by an attending physician.  There is no in-house call for fellows and no telephone or beeper call during the week.  The Pulmonary Function Laboratory fellow rotates weekend on call duties with the MLH Consult Service and Transplant fellows.


Lung Transplant Service

The UCSF Lung Transplant Service is one of the top 10% in volume in the world, performing approximately 30-40 transplants per year.  The Pulmonary Fellows rotate on this multidisciplinary service staffed by Transplant Pulmonologists, Surgeons, Pharmacists, and Nurse Practitioners.  In addition to overseeing the evaluation and management of pre- and post-transplant patients, fellows gain experience in interventional bronchoscopy including transbronchial biopsies, stent placement, and dilatations.  There are specific conferences related to transplant including evaluation for listing, Pathology, and Radiology.  There is no in-house night call for fellows, but one fellow is available by telephone or long-range pager at all times.  The Transplant Fellow rotates weekend coverage with the Pulmonary Consult Service and Pulmonary Function Laboratory fellows.

Intensive Care Unit

The combined Medical-Surgical ICU at MLH is an open unit with 38 beds for critically ill adults. The unit is staffed by fellows in pulmonary and critical care medicine, residents in internal medicine, anesthesiology and surgery and by two attending physicians. Rounds are conducted daily with the attending physician, who is available at all times. Pulmonary fellows rotate through this unit as part of a 6-month critical care training program. As a part of daily rounds, imaging studies on all patients are reviewed with a staff radiologist. During the ICU rotation, fellows acquire experience and training in airway management, ventilator management, and insertion of systemic and pulmonary arterial catheters.  In addition to the Medical-Surgical ICU, fellows rotate through critical care units devoted primarily to Neurology/Neurosurgery, and Cardiology and Cardiothoracic Surgery.

~180 patients are admitted to the ICU each month. These include patients who have had cardiac surgery or other complicated surgical procedures as well as many medical patients. ~80% of patients require mechanical ventilation and 70% require invasive hemodynamic monitoring. There are morning ICU seminars four days per week.


Sleep Disorders Center

All fellows receive training in diagnosis and treatment of sleep-related disorders at the Sleep Disorders Center at Mt. Zion Hospital (which is part of the Moffitt-Long Division) under the direction of David Claman, M.D. Fellows gain additional experience in performance and interpretation of sleep studies during consultation services at the VA Medical Center and the San Francisco General Hospital.



VETERANS AFFAIRS MEDICAL CENTER (VAMC)

The San Francisco Veterans Affairs Medical Center (SFVAMC) is a 250-bed facility that is an integral part of the UCSF teaching and research programs. The hospital serves as the major referral center for outpatient VA clinics in Northern California and Nevada. Due to the nature of the population served, there are a large number of patients with chronic obstructive pulmonary disease, lung cancer, and asthma as well as interstitial lung diseases, pleural disorders, sleep disorders, pulmonary infections and AIDS, and pulmonary vascular diseases.


Faculty and Attending Staff

Dr. George H. Caughey, MD is Chief of the Pulmonary and Critical Care Medicine Section.

Members of the Pulmonary & Critical Care Medicine Attending Physician Staff at SFVAMC include:


The two clinical rotations for first-year pulmonary fellows at VAMC are:

Pulmonary Consultation Service

Working one-on-one with an attending pulmonary physician, fellows on this rotation serve as inpatient consultants for the Medical and Surgical Services. In addition, they provide rapid turn-around evaluations in ambulatory care for patients referred for lung cancer and receive intensive instruction in performing bronchoscopic procedures including bronchoalveolar lavage as well as transbronchial, airway mucosal, and Wang needle biopsies. At weekly meetings, biopsies are reviewed with a pathologist, and diagnostic and therapeutic approaches are discussed at a Medical-Surgical-Oncologic Chest Conference. Fellows also receive instruction in interpretation of chest imaging studies from a chest radiologist and are responsible for reviewing sleep and pulmonary function studies.

ICU Team

Under a new closed-unit model, the ICU Team provides comprehensive care for MICU patients and participates actively and daily in the care of SICU patients. Two faculty members serve as attendings at all times, usually one pulmonologist and one surgeon or anesthesiologist. The pulmonary fellow on this rotation works with 3 UCSF medical residents, 1 surgical resident, and 1 anesthesiology resident to provide a multidisciplinary approach to the care of these patients.



SAN FRANCISCO GENERAL HOSPITAL (SFGH)

SFGH is a 382-bed acute care hospital that is fully integrated into the UCSF teaching program. As a public hospital with the most active emergency service in the city, it admits large numbers of acutely ill patients. The spectrum of patients at SFGH is representative of that commonly encountered in a City/County institution. Most patients are admitted because of an acute illness rather than electively. These illnesses include infectious diseases, severe asthma, drug overdoses, complicated pleural problems and pulmonary complications of HIV infection.


Faculty and Attending Staff

Dr. Courtney Broaddus, MD is Chief of the SFGH Division of Pulmonary and Critical Care Medicine.

Members of the Pulmonary & Critical Care Medicine Attending Physician Staff at SFGH include:


Consultation and Diagnostic Service

The SFGH Pulmonary Consultation Service is staffed by two Fellows and an Attending Physician. Often there is a senior internal medicine resident and a medical student on the service as well. The fellow is responsible for organizing the daily activities of the service and for immediate supervision of the resident and student. Approximately 50 new consultations are seen each month. In addition, ~60 patients per month with known or suspected HIV infection undergo screening evaluations for respiratory complaints. The majority of these latter patients do not require full consultation or bronchoscopic procedures. ~20 full consultations each month involve HIV-infected patients.

There are daily rounds with the attending physician, who is available at all times. Fellows do not take in-house call, but are available by telephone or beeper. In addition, there are daily rounds with an attending chest radiologist to review all radiographic studies performed on patients being seen by the Consultation Service and all patients in the Medical ICU. There is a very close working relationship between the Department of Radiology at SFGH and the Consultation and ICU services. While on the consultation service the fellow is responsible for performing bronchoscopies under the immediate supervision of an attending physician. Approximately 30 bronchoscopic procedures are performed each month, of which ~50% are for evaluation of known or suspected HIV-related disease. Biopsies are reviewed on a regular basis with staff pathologists, and there are weekly pathology and surgical conferences.

The fellows are responsible for performing special studies of lung function and for interpreting all routine pulmonary function tests and screening sleep studies. These studies are reviewed daily with an attending physician.


Medical Intensive Care Unit

The pulmonary fellows are responsible for consultation in the Medical ICU. The ICU is staffed by three senior medical residents and an attending physician. Primary responsibility for patient care remains with the ward housestaff team and they are supervised in all aspects of patient care by the ICU resident and attending who is the physician of record for each patient admitted to the unit. There are ~50 admissions each month. Of these, ~50% require mechanical ventilation and ~30% undergo invasive hemodynamic monitoring. Unit rounds are scheduled twice a day. The attending physician is available at all times. The fellow also spends time with Respiratory Therapists learning details of ventilators and of overall operation of a Respiratory Therapy Department.

Outpatient Consultation Service

The Consultation Service fellows and attending physician are available daily to see outpatients for whom consultation is requested, usually from 1-3 PM. Consultations are received from a variety of community and SFGH clinics and are answered within one working day.


CRITICAL CARE TRAINING

Critical care training is a major emphasis of the training program. During the first year of clinical fellowship, the fellows consult on critically ill patients in ICUs in all three hospitals. Formal training in critical care that qualifies fellows to take the ABIM Critical Care Medicine certification examination is offered. Fellows are required to take six months of critical care training during the second fellowship year. Fellows spend two months in supervised training in the Operating Room with the opportunity to learn airway management in routine and complicated patients. Also, the fellows become more familiar with a wide variety of surgical patients and have an opportunity to increase their skill in placement of systemic arterial, central venous, and pulmonary arterial catheters. The remaining 4 months are spent in the Medical-Surgical Moffitt-Long ICU (38-beds) and the Surgical ICU (14-beds) at SFGH. The ICU patient population at MLH includes patients that have undergone major vascular and cardiac surgery, as well as heart, lung, liver, bone marrow, and kidney transplantation. In addition, there are patients from the general medical and surgical services with the usual spectrum of pulmonary and non-pulmonary problems resulting in respiratory, cardiac, and other organ systems failure. At SFGH, trauma is the major reason for admission. The fellows have an opportunity to increase their skills in the diagnosis and management of these complex patients with an emphasis on skills related to mechanical ventilation, hemodynamic monitoring, management of simple and complex cardiac arrhythmias, and procedures such as chronic arterial venous hemofiltration and intra-aortic balloon pump management.

Faculty and Attending Staff

Michael A. Matthay, MD (Pulmonary and Critical Care Medicine and Department of Anesthesia) is Director of Critical Care Medicine Training and is Associate Director of the ICU at MLH; Michael Gropper, MD, PhD (Department of Anesthesia) is Director. Pulmonologists on the ICU attending staff include Drs. Mark Eisner, John Fahy, Jeanine Weiner-Kronish, Doug White, Paul Wolters, Prescott Woodruff, and John Luce (SFGH).


OUTPATIENT CLINICS

Upon joining the Fellowship Program, each Fellow is assigned to an outpatient continuity clinic at one of the three hospitals and continues in that assigned clinic for the duration of her/his training.   Each clinic meets one half day per week and is staffed by a number of Pulmonary Attendings who are always available and who review each case.   At SFGH the fellow on the Consultation Service also sees patients in the Tuberculosis Clinic one half day each week.  In accordance with ACGME regulations, fellows attend an additional continuity clinic for 6 of the 18 months of research training that occurs during their 3 ACGME years, usually choosing from one or more of the disease-specific pulmonary clinics (e.g., asthma, CF, ILD, HIV, TB, Pulmonary Hypertension, transplant).


CONFERENCES

Every Friday throughout the year didactic lectures and discussions of pulmonary physiology and function testing are presented at the Physiology Seminar at MLH. On Tuesday afternoons throughout the year there is a clinical chest conference at which clinical fellows from each of the three hospitals, with the assistance of faculty advisors, organize and present a case. These two conferences are required for all fellows. In addition, each hospital has its own schedule of clinical, radiology, and pathology conferences, journal clubs and tumor boards.  Fellows, residents and faculty participate formally and informally in all of these conferences.  Every other week there is a Program-wide Faculty/Fellows Research Conference.  In addition, fellows present and participate in smaller research conferences according to their research focus.

Fellows receive specific instruction, mentoring, and critiques on how to make slides, organize and present talks. In addition, a formal course, “The Art of Lecturing” is provided.




ADDITIONAL CLINICAL TRAINING OPTIONS

Occupational and Environmental Medicine

Dr. Robert Goldberg is the Director of the Occupational Medicine Residency Program at UCSF. Dr. Paul Blanc is Division Chief at MLH.  Dr. John Balmes is Division Chief at SFGH.  Trainees interested in Occupational and/or Environmental Medicine may choose a training track combined with the Occupational Medicine Residency Program. As part of this program, the trainee will obtain a Master's degree in Public Health from the UC Berkeley. If the trainee participates sufficiently in the Occupational Medicine Residency Program and obtains an MPH degree, she/he would be board-eligible in Occupational Medicine. National Institute of Occupational Safety and Health (NIOSH) funding is available to support trainees who pursue training and research in the area of occupational and/or environmental lung diseases.


Research Training

The UCSF Pulmonary Research Training Program has been in existence since 1958 and has been funded in part by a National Heart, Lung, and Blood Institute Multidisciplinary Research Training Program (HL-07185) for more than three decades. The program provides training in basic and clinical sciences important to the respiratory system and depends on the interdisciplinary staff of the Cardiovascular Research Institute, together with special basic and clinical research skills of other members of the UCSF campus. The grant accommodates a total of thirteen postdoctoral trainees, including both MDs and PhDs and is under the direction of Jay Nadel, M.D. The Research Training Program includes a total of approximately 60 trainees; in addition to the NIH Training Grant, fellowship funds are derived from multiple government and private sources. The NIH Research Training Grant is evaluated nationally by peers every five years, and was last successfully renewed in 2007.

The program provides research training in bench and clinical sciences important to the respiratory system. The main focus is an actual experience in the "laboratory" (broadly defined) under faculty supervision, and employing approaches applicable at the molecular, cellular, tissue, organ, whole animal, or clinical level. Special educational opportunities have been created to prepare individuals for careers in academic medicine. The education program provides special courses, small group conferences, seminars (including ethics), and personal instruction specifically designed for trainees, as well as bench science courses (including cell biology, biochemistry, and molecular biology), and clinical research courses (epidemiology and biostatistics). The program is designed to provide a broad knowledge of modern scientific investigation, and to increase the writing and teaching skills of trainees who will spend a lifetime as members of a medical school faculty.  Each fellow meets with Dr. Nadel early in the first year, to discuss his/her research interests and to help identify potential research mentors.  Subsequently, with the help of a Research Training Committee (comprised of faculty chosen by each fellow), Dr. Nadel carefully monitors the progress and satisfaction of the trainees and guarantees that at least 80 percent of the trainee’s time is devoted to research.

A UCSF Pulmonary Research Retreat is held annually in November. The goal of the retreat is to provide fellows a broad overview of the many opportunities in research at UCSF.


Research training can proceed in two directions:
(1) Training in Bench Investigation; and
(2) Training in Clinical Investigation (Clinical Scholars Program),
as follows:

Training in Bench Investigation

Due to the dramatic advances in cell and molecular biology, the training program has pursued several approaches to incorporate the disciplines of "modern" biology and genetics. Ph.D.’s have been recruited at the faculty level who can train pulmonary fellows and collaborate with the physician-scientists in the program. Collaborations have been developed with basic scientists in other programs and departments on and off the campus. Faculty and trainees have been encouraged to participate in new courses. The net effect of these three approaches has been to infuse the training program with state-of-the-art technology and to integrate more closely the basic and clinical sciences.

A broad range of research opportunities in molecular and cellular biology of lung diseases are available and can be accessed online via the Biosketches of the Program Faculty as well as the Biosketches of the Faculty in the UCSF Program in Biological Sciences (PIBS). Currently, these include investigations of airway inflammation; regulation of surfactant proteins; proteases; mast cell growth, phenotype, and secretion; neuropeptides and neurogenic inflammation; lung injury and repair, stress-induced proteins; ion transport in airway epithelium; cellular and molecular biology of cystic fibrosis; mucin gene regulation; regulation of airway secretion; adhesion molecules; inflammatory cells and mediators in pleural disease; transmembrane signaling in smooth muscle; and pulmonary immune responses, angiogenesis and lung carcinogenesis. In addition, active programs in transcriptional profiling and genetic analysis of asthma, pulmonary fibrosis, and emphysema in both humans and murine models have been recently established at UCSF. UCSF also enjoys a rich array of basic science programs not listed above in physical proximity to the CVRI which may be of special interest to individual applicants. The Program Faculty will assist all applicants in selecting a research program tailored to an individual’s interests and experience.  Of note, although each fellow’s research program should have relevance to Pulmonary Disease, it need not be tied to a member of the Pulmonary Division.



Clinical Scholars Program

Clinical and Translational Research is a well-established and valued part of the UCSF program, and the range of research opportunities for Clinical Scholars is almost as broad as that for bench investigation.  Faculty have built upon their prior existing programs to compete successfully for NHLBI funding for clinical research networks, and UCSF investigators have been awarded funding for the Asthma Clinical Research Network, the COPD Clinical Research Network, the ARDS Network, and the Interstitial Lung Disease Network.  Substantial space and resources are devoted to these clinical research programs that form the infrastructure for expanded clinical research in these and other lung disease areas.

Trainees may choose a pathway in advanced clinical research and investigation as a Clinical Scholar. The pulmonary Clinical Scholars program is coordinated with the clinical scholar training from other fellowships in an interdisciplinary UCSF sponsored program (Advanced Training in Clinical Research). Each trainee completes core courses in clinical research design, ethics, scientific writing, and statistical methods. The trainee also pursues a supplemental didactic curriculum tailored to her/his specific research goals with the guidance of a primary clinical investigator advisor and a faculty advisory committee. The trainee pursues specific clinical research projects in parallel with all didactic training; possible areas of study include advanced pulmonary physiology, clinical trials, natural history studies, medical ethics, meta-analysis, health services research, survey research, and other epidemiological investigations.  Well-developed programs exist in asthma, COPD, CF, ARDS/ALI, ILD, TB, HIV, Lung Transplant, Sleep Disorders, effects of Tobacco Smoke, medical ethics/end of life decisions, and health outcomes.

Those interested in clinical research may also choose a joint training track combined with the Occupational Medicine Residency Program (see Additional Training Options above).

For more information about the current areas of research interest click here.


SALARY AND VACATIONS

Funding for trainees in the Training Program in Pulmonary and Critical Care Medicine comes from a variety of sources, and rates are set by the University of California.  Although trainees are not required to generate their own funding, faculty work with more senior fellows to help them develop grant-writing skills.  Trainees are entitled to four weeks of leave during the first year. For more information, please contact the Fellowship Coordinator.

Last Update: 06/06/08

     
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